BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB014B01LP1|AL426633
(782 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1620 1513 0.0
>3x_Contig1620
Length = 12263
Score = 1513 bits (762), Expect = 0.0
Identities = 778/782 (99%), Gaps = 2/782 (0%)
Strand = Plus / Minus
Query: 1 atcacattcatagaagacttacgaccggagtaaatgaaaaagtttcaggtagtgatagcg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1410 atcacattcatagaagacttacgaccggagtaaatgaaaaagtttcaggtagtgatagcg 1351
Query: 61 agaaagccaaacaggttgaaaaagataatgagaaactgaatgccctttgtataagatgtg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1350 agaaagccaaacaggttgaaaaagataatgagaaactgaatgccctttgtataagatgtg 1291
Query: 121 caaggatgtggaggcgttacggtattagatggtcatctcctatcgatgttttaagacaac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1290 caaggatgtggaggcgttacggtattagatggtcatctcctatcgatgttttaagacaac 1231
Query: 181 tttatggtagtagttcttcatcggtccagggtgcgataaaggacttactggaggataatg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1230 tttatggtagtagttcttcatcggtccagggtgcgataaaggacttactggaggataatg 1171
Query: 241 acgaacaggcaatttgttgttccactaatcagagccttttcaaaaaatctggactgggaa 300
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 1170 acgaacaggcaatttgttgttccactaatcag-gccttttcaaaaaatctggactgggaa 1112
Query: 301 ctagtgatagatacggaatcaatcactaaacagcgctacgcagcgacagawaatcccgaa 360
||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||
Sbjct: 1111 ctagtgatagatacggaatcaatcactaaacagcg-tacgcagcgacagataatcccgaa 1053
Query: 361 aagctattaaaaatgaagagaaacactttatcttctcaagcacaaatgaataaatctgtt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1052 aagctattaaaaatgaagagaaacactttatcttctcaagcacaaatgaataaatctgtt 993
Query: 421 aaaaagttaatagatttgaattcaatcaaaccagtgaaccttgaagaaagtctcatgggc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 992 aaaaagttaatagatttgaattcaatcaaaccagtgaaccttgaagaaagtctcatgggc 933
Query: 481 tacatttctcgcatagaggctcagatcaagaggaaagaagagattaaattcaagagacaa 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 932 tacatttctcgcatagaggctcagatcaagaggaaagaagagattaaattcaagagacaa 873
Query: 541 aaggaaagagcgttacaagaacagctaatatccgaggcacatatgaagaaatcttcaaaa 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 872 aaggaaagagcgttacaagaacagctaatatccgaggcacatatgaagaaatcttcaaaa 813
Query: 601 tctgccattacaaccaaacaagcacaggtgcttgtaactgaaaacaaaccacagataact 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 812 tctgccattacaaccaaacaagcacaggtgcttgtaactgaaaacaaaccacagataact 753
Query: 661 gaaatacaagtgaaacaacaaatagttccatatgccagtccgtcagtcataagawaactg 720
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 752 gaaatacaagtgaaacaacaaatagttccatatgccagtccgtcagtcataagaaaactg 693
Query: 721 atgccaaatggtgagttctcgataaacatagaatttgaaacgcctactgttgctcctaat 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 692 atgccaaatggtgagttctcgataaacatagaatttgaaacgcctactgttgctcctaat 633
Query: 781 gc 782
||
Sbjct: 632 gc 631
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6405
Number of Sequences: 1807
Number of extensions: 6405
Number of successful extensions: 36
Number of sequences better than 1.0e-20: 1
length of query: 782
length of database: 10,358,551
effective HSP length: 16
effective length of query: 766
effective length of database: 10,329,639
effective search space: 7912503474
effective search space used: 7912503474
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)